#NEXUS [written Mon Mar 30 13:29:16 BST 2020 by Mesquite version 3.61 (build 927) at Gregs-MacBook-Pro.local/127.0.0.1] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=41; TAXLABELS Herrerasaurus_ischigualastensis Velociraptor_mongoliensis Archaeopteryx_lithographica Incisivosaurus_gauthieri_merged Caudipteryx_zoui Avimimus_portentosus Avimimus_nemegtensis Microvenator_celer Oviraptor_philoceratops Rinchenia_mongoliensis Citipati_osmolskae Zamyn_Khondt_oviraptorid Khaan_mckennai Conchoraptor_gracilis Machairasaurus_leptonychus Nemegtomaia_barsboldi Heyuannia_huangi Heyuannia_yanshini Gigantoraptor_erlianensis Caenagnathasia_martinsoni Leptorhynchos_elegans Chirostenotes_pergracilis Caenagnathus_collinsi Anzu_wyliei Hagryphus_giganteus Elmisaurus_rarus Nomingia_gobiensis Epichirostenotes_curriei Banji_long Caudipteryx_dongi Jiangxisaurus_ganzhouensis Nankangia_jiangxiensis Shixinggia_oblita Wulatelong_gobiensis Yulong_mini Huanansaurus_ganzhouensis Tongtianlong_limosus Corythoraptor_jacobsi Apatoraptor_pennatus Oksoko_avarsan Anomalipes_zhaoi ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=246; FORMAT DATATYPE = STANDARD RESPECTCASE GAP = - MISSING = ? SYMBOLS = " 0 1 2"; CHARSTATELABELS 1 Ratio_of_the_preorbital_skull_length_to_the_basal_skull_length / 0.6_or_more_ less_than_0.6, 2 'Pneumatized crest-like prominence on the skull roof' / absent_ present_, 3 'Ratio of the width (across premaxilla-maxilla suture) of the snout to its length' / less_than_0.3_ '0.3-0.4 ' more_than_0.4_, 4 'Ratio of the length of the tomial margin of the premaxilla to the premaxilla height (ventral to the external naris)' / '1.0-1.4 ' more_than_1.7_ 0.7_or_less_, 5 Inclination_of_the_anteroventral_margin_of_the_premaxilla_relative_to_the_horizontally_positioned_ventral_margin_of_the_jugal / vertical_ posterodorsal_ anterodorsal_, 6 Ventral_projection_of_the_premaxilla_below_the_ventral_margin_of_the_maxilla / absent_ present, 7 Ventral_projection_of_the_premaxilla_below_ventral_margin_of_maxilla / small_ significant, 8 'Share of the premaxilla (ventral) in the basal skull length' / 0.10_or_less_ 0.12_or_more_, 9 Pneumatization_of_the_premaxilla / absent_ present_, 10 'Ratio of the length of the maxilla (in lateral view) to the basal skull length' / '0.4-0.7 ' less_than_0.4_, 11 Subantorbital_portion_of_the_maxilla / not_inset_medially_ inset_medially_, 12 'Palatal shelf of the maxilla with two longitudinal ridges and a tooth-like ventral process' / absent_ present_, 13 Ventral_margins_of_maxilla_and_jugal / margins_form_a_straight_line_ 'the ventral margin of the maxilla slopes anteroventrally, its longitudinal axis at an angle of ca. 120??? to the longitudinal axis of the jugal ', 14 Rim_around_antorbital_fossa / well_pronounced_ poorly_delimited_, 15 Antorbital_fossa / bordered_anteriorly_by_the_maxilla_ bordered_anteriorly_by_the_premaxilla_, 16 Accessory_maxillary_fenestrae / absent_ at_least_one_accessory_fenestra_present_, 17 Nasal_along_midline / longer_than_frontal_ shorter_than_or_as_long_as_the_frontal_, 18 Nasals / separate_ fused_, 19 Subnarial_process_of_the_nasal / long_ short_, 20 Shape_of_the_narial_opening / longitudinally_oval_ 'teardrop-shaped, slightly longer than wide ' much_longer_than_wide_, 21 Nasal_recesses / absent_ present_, 22 External_naris_position_relative_to_the_antorbital_fossa / naris_and_fossa_widely_separated_ posterior_margin_of_the_naris_reaching_the_fossa_ overlapping_anterodorsally_most_of_the_fossa_, 23 Ventral_margin_of_the_external_naris / at_the_level_of_the_maxilla_ dorsal_to_the_maxilla_, 24 Prefrontal / present_ absent_or_fused_with_the_lacrimal_, 25 Lacrimal_shaft / not_projecting_outward_beyond_the_orbital_plane_and_lateral_surface_of_the_snout_ the_middle_part_of_the_shaft_projecting_laterally_to_form_a_flattened_transverse_bar_in_front_of_the_eye_, 26 Lacrimal_recesses / absent_ present_, 27 Ratio_of_the_length_of_the_orbit_to_the_length_of_the_antorbital_fossa / '0.7-0.9 ' 1.2_or_more_, 28 Ratio_of_the_length_of_the_parietal_to_the_length_of_the_frontal / 0.6_or_less_ 1.0_or_more_, 29 Pneumatization_of_the_skull_roof_bones / absent_ present_, 30 Sagittal_crest_along_the_interparietal_contact / absent_ present_, 31 Supratemporal_fossa / invading_the_frontal_ not_invading_the_frontal_, 32 Infratemporal_fenestra / 'dorsoventrally elongate, narrow anteroposteriorly ' 'subquadrate, its anteroposterior length comparable to the orbital length ', 33 Pneumatization_of_the_squamosal / absent_ present_, 34 'Cotyle-like incision on the ventrolateral margin of the squamosal (for reception of the dorsal end of the ascending process of the quadratojugal)' / absent_ present_, 35 Ventral_ramus_of_the_jugal / deep_dorsoventrally_and_flattened_lateromedially_ 'shallow dorsoventrally or rod-shaped ', 36 Jugal_process_of_the_postorbital / 'not extending ventrally below two-thirds of the orbit height ' 'long, extending ventrally close to the base of the postorbital process of the jugal ', 37 Postorbital_process_of_the_jugal / posterodorsally_inclined_ perpendicular_to_the_ventral_ramus_of_the_jugal_, 38 Postorbital_process_of_the_jugal / present_ absent_, 39 'Jugal-postorbital contact' / present_ absent_, 40 Quadratojugal_process_of_the_jugal_in_lateral_view / forked_ not_forked_ fused_with_the_quadratojugal_, 41 'Quadratojugal-squamosal contact' / absent_ present_, 42 'Ascending (squamosal) process of the quadratojugal' / 'bordering ca. the ventral half, or less, of the infratemporal fenestra ' 'bordering the ventral two-thirds or more of the infratemporal fenestra ', 43 'Ascending (squamosal) process of the quadratojugal' / present_ absent_, 44 Angle_between_the_ascending_and_jugal_processes_of_the_quadratojugal / ca._90???_ less_than_90???_, 45 Quadrate_process_of_the_quadratojugal / 'well developed, extending posteriorly or posteroventrally beyond the posterior margin of the ascending process ' not_extending_beyond_the_posterior_margin_of_the_ascending_process_, 46 Dorsal_part_of_the_quadrate / erect_ bent_backward_, 47 Otic_process_of_the_quadrate / articulating_only_with_the_squamosal_ articulating_with_the_squamosal_and_the_lateral_wall_of_the_braincase_, 48 Pneumatization_of_the_quadrate / absent_ present_, 49 Lateral_accessory_process_on_the_distal_end_of_the_quadrate_for_articulation_with_the_quadratojugal / absent_ present_, 50 Lateral_cotyle_for_the_quadratojugal_on_the_quadrate / absent_ present_, 51 Mandibular_condyles_of_quadrate / posterior_to_the_occipital_condyle_ in_the_same_vertical_plane_as_the_occipital_condyle_ anterior_to_the_occipital_condyle_, 52 Nuchal_transverse_crest / pronounced_ not_pronounced_, 53 'Occiput position in relation to the ventral margin of the jugal-quadratojugal bar' / about_perpendicular_ inclined_anterodorsally_, 54 Paroccipital_process / directed_laterally_ directed_ventrally_, 55 Foramen_magnum / smaller_than_or_equal_in_size_to_the_occipital_condyle_ larger_than_the_occipital_condyle_, 56 Basal_tubera / modestly_pronounced_ 'well developed, widely separated ', 57 Pneumatization_of_the_basisphenoid / weak_or_absent_ extensive_, 58 Basipterygoid_processes / well_developed_ strongly_reduced_, 59 Basipterygoid_processes / present_ absent_, 60 Parasphenoid_rostrum / horizontal_or_anterodorsally_directed_ sloping_anteroventrally_, 61 Depression_in_the_periotic_region / absent_ present_, 62 Pneumatization_of_the_periotic_region / absent_or_weak_ extensive_, 63 Quadrate_ramus_of_the_pterygoid / distant_from_the_braincase_wall_ overlapping_the_braincase_, 64 Pterygoid_basal_process_for_contact_with_the_basisphenoid / absent_ present_, 65 Ectopterygoid_position / lateral_to_the_pterygoid_ anterior_to_the_pterygoid_, 66 Ectopterygoid_contacts_with_the_maxilla_and_lacrimal / absent_ present_, 67 Ectopterygoid / 'short anteroposteriorly with a hook-like jugal process ' 'elongate, shaped like a Viking ship, without a hook-like process ', 68 'Massive pterygoid-ectopterygoid longitudinal bar' / absent_ present_, 69 Palate_extending_below_the_cheek_margin / absent_ present_, 70 Palatine / tetraradiate_or_trapezoidal_ 'triradiate, without a jugal process ' 'developed in horizontal, longitudinal, and transverse planes perpendicular to each other ', 71 Pterygoid_wing_of_the_palatine / dorsal_to_the_pterygoid_ ventral_to_the_pterygoid_, 72 Maxillary_process_of_the_palatine / shorter_than_the_vomeral_process_ longer_than_the_vomeral_process_, 73 Vomer / distant_from_the_parasphenoid_rostrum_ approaching_or_in_contact_with_the_parasphenoid_rostrum_, 74 'Suborbital (ectopterygoid-palatine) fenestra' / well_developed_ closed_or_reduced_, 75 Jaw_joint / distant_from_the_midline_of_the_skull_ close_to_the_skull_midline_, 76 Movable_intramandibular_joint / present_ suppressed_, 77 Mandibular_symphysis / loose_ tightly_sutured_ fused_, 78 Extended_symphyseal_shelf_at_the_mandibular_symphysis / absent_ present_, 79 Downturned_symphyseal_portion_of_the_dentary / absent_ present_, 80 'U-shaped mandibular symphysis' / absent_ present_, 81 Ratio_of_the_length_of_the_retroarticular_process_to_the_total_mandibular_length / less_than_0.05_or_the_process_absent_ ca._0.10_, 82 Dentary / elongate_ 'proportionally short and deep, with maximum depth of dentary between 25% and 50% of dentary length (with length measured from the tip of the jaw to the end of the posterodorsal process) ' 'extremely short and deep, with maximum depth 50% or more of dentary length ', 83 Ratio_of_the_height_of_the_external_mandibular_fenestra_to_the_length_of_the_fenestra / '0.2-0.5 ' '0.7-1.0 ', 84 External_mandibular_fenestra / present_ absent_, 85 Ratio_of_the_length_of_the_external_mandibular_fenestra_to_total_mandibular_length / '0.15-0.20 ' not_more_than_0.10_or_fenestra_absent_ 0.25_or_more_, 86 Process_of_the_surangular_dividing_the_external_mandibular_fenestra / absent_ short_and_broad 'elongate and spike-like', 87 'Co-ossification of the articular with the surangular' / absent_ present_, 88 Mandibular_rami_in_dorsal_view / straight_ laterally_bowed_at_midlength_, 89 Anterodorsal_margin_of_dentary_in_lateral_view / straight_ concave_ broadly_concave_, 90 Posterior_margin_of_the_dentary / 'incised, producing two posterior processes ' oblique_, 91 Posterodorsal_process_of_the_dentary_long_and_shallow / present_ absent_, 92 'Posteroventral process of the dentary shallow and long, extending posteriorly at least to the posterior border of the external mandibular fenestra' / absent present_, 93 Coronoid_process / posteriorly_positioned_and_vertically_projected_ 'anteriorly positioned, near the midpoint of the jaw, with a medially hooked apex ', 94 Surangular_foramen / present_ absent_, 95 Mandibular_articular_facet_for_the_quadrate / comprising_the_surangular_and_the_articular_ formed_exclusively_of_the_articular_, 96 Mandibular_articular_facet_for_the_quadrate / with_one_or_two_cotyles_ 'convex in lateral view, transversely wide ', 97 Position_of_the_quadrate_articular_surface_relative_to_the_level_of_the_adjoining_dorsal_margin_of_the_mandibular_ramus / ventral 'moderately elevated, quadrate articulation grades smoothly into remainder of mandible' 'highly elevated, anterior and posterior margins of quadrate articulation at nearly right angles to remainder of mandible', 98 Anterior_part_of_the_prearticular / 'deep, approaching the dorsal margin of the mandible ' 'shallow, strap-like, not approaching the dorsal mandibular margin ', 99 Splenial / 'subtriangular, approaching the dorsal mandibular margin ' 'strap-like, shallow, not approaching the margin ', 100 Mandibular_adductor_fossa / 'anteriorly delimited, occupying the posterior part of the mandible ' 'large, anteriorly and dorsally extended, not delimited anteriorly ', 101 Coronoid_bone / well_developed_ strongly_reduced_, 102 Coronoid_bone / present_ absent_, 103 Premaxillary_teeth / present_ absent_, 104 Maxillary_tooth_row / extends_at_least_to_the_level_of_the_preorbital_bar_ does_not_reach_the_level_of_the_preorbital_bar_ maxillary_teeth_absent_, 105 Dentary_teeth / present_ absent_from_tip_of_jaw_but_present_posteriorly_ absent_, 106 'Number of cervicals (excluding cervicodorsal)' / not_more_than_10_ more_than_10_, 107 Anterior_articular_facets_of_the_centra_in_the_anterior_postaxial_cervicals / not_inclined_or_only_slightly_inclined_ 'strongly inclined posteroventrally, almost continuous with the ventral surfaces of the centra ', 108 Centra_of_the_anterior_cervicals / not_extending_posteriorly_beyond_their_respective_neural_arches_ extending_posteriorly_beyond_their_respective_neural_arches_, 109 Epipophyses_on_the_postaxial_cervicals / in_the_form_of_a_low_crest_or_rugosity_ 'prong-shaped ', 110 Shafts_of_cervical_ribs / longer_than_their_respective_centra_ not_longer_than_their_respective_centra_, 111 'Lateral pneumatic fossae ("pleurocoels") on the dorsal centra' / absent_ present_, 112 Ossified_uncinate_processes_on_the_dorsal_ribs / absent_ present_, 113 Number_of_vertebrae_included_in_the_synsacrum_in_adults / not_more_than_5_ 6_ '7-8 ', 114 Sacral_spines_in_adults / unfused_ fused_, 115 Lateral_pneumatic_fossae_on_the_sacral_centra / absent_ present_, 116 Transition_point_on_the_caudals / absent_ present_, 117 Number_of_caudals_with_transverse_processes / 15_or_more_ fewer_than_15_, 118 Lateral_pneumatic_fossae_on_the_caudal_centra / absent_ present_at_least_in_the_anterior_part_of_the_tail_, 119 Neural_spines_confined_to / at_least_23_anterior_caudals_ at_most_16_anterior_caudals_, 120 Number_of_caudals / more_than_35_ 30_or_fewer_, 121 Posterior_caudal_prezygapophyses / overlapping_less_than_half_of_the_centrum_of_the_preceding_vertebra_ overlapping_at_least_half_of_the_centrum_of_the_preceding_vertebra__, 122 Hypapophyses_in_the_cervicodorsal_vertebral_region / absent_ small_ prominent_, 123 Posterior_hemal_arches / deeper_than_long_ longer_than_deep_, 124 Ratio_of_the_length_of_the_scapula_to_the_length_of_the_humerus / '0.8-1.1 ' 1.2_or_more_ 0.7_or_less_, 125 Acromion / projecting_dorsally_ projecting_anteriorly_ everted_laterally_, 126 Posteroventral_process_of_the_coracoid / 'absent or short, not extending beyond the glenoid diameter ' 'long, posteroventrally extending beyond the glenoid ', 127 Orientation_of_the_glenoid_on_the_pectoral_girdle / posteroventral_ lateral_, 128 Deltopectoral_crest / 'low, its width equal to, or smaller than, the shaft diameter ' 'expanded, wider than the shaft diameter ', 129 'Extent of the deltopectoral crest (measured from the humeral head to the apex)' / about_the_proximal_third_of_the_humerus_length_or_less_ 'ca. 40%-50% of the humerus length ', 130 Shaft_of_the_ulna / straight_ 'bowed, convex posteriorly ', 131 Ratio_of_the_length_of_the_radius_to_the_length_of_the_humerus / 0.80_or_less_ 0.85_or_more_, 132 'Combined length of manual phalanges III-1 and III-2' / 'greater than the length of phalanx III-3 ' 'less than or equal to the length of phalanx III-3 ', 133 Ratio_of_the_length_of_metacarpal_I_to_the_length_of_metacarpal_II / 0.5_or_more_ less_than_0.5_, 134 Proximal_margin_of_metacarpal_I_in_dorsal_view / 'straight, horizontal ' angled_due_to_a_medial_extent_of_carpal_trochlea_, 135 Metacarpal_II_relative_to_metacarpal_III / shorter_ longer_ subequal_, 136 Ratio_of_the_length_of_metacarpal_II_to_the_length_of_the_humerus / 0.4_or_less more_than_0.4_, 137 Ratio_of_the_length_of_the_manus_to_the_length_of_the_humerus_plus_the_radius / '0.50-0.65 ' more_than_0.65_ less_than_0.50_, 138 Ratio_of_the_length_of_the_manus_to_the_length_of_the_femur / '0.3-0.6' more_than_0.7, 139 Ratio_of_the_length_of_the_humerus_to_the_length_of_the_femur / '0.50-0.69 ' 0.70_or_more_, 140 Dorsal_margins_of_opposite_iliac_blades / well_separated_from_each_other_ close_to_or_contacting_each_other_along_their_medial_sections_, 141 Dorsal_margin_of_the_ilium_along_the_central_portion_of_the_blade / straight_ arched_, 142 'Preacetabular process of the ilium relative to the postacetabular process (lengths measured from the center of the acetabulum)' / shorter_or_equal_ longer_, 143 Preacetabular_process / not_expanded_or_weakly_expanded_ventrally_below_the_level_of_the_dorsal_acetabular_margin_ expanded_ventrally_well_below_the_level_of_the_dorsal_acetabular_margin_, 144 Morphology_of_the_ventral_margin_of_the_preacetabular_process / 'cuppedicus fossa absent, margin transversely narrow ' cuppedicus_fossa_or_a_wide_shelf_present_ 'margin flat, wide at least close to the pubic peduncle ', 145 Anteroventral_extension_of_the_preacetabular_process / absent_ present_, 146 Anteroventral_extension_of_the_preacetabular_process / with_rounded_tip_ 'hook-like ', 147 Posterior_end_of_the_postacetabular_process / truncated_or_broadly_rounded_ narrowed_or_acuminate_, 148 Anteroposterior_length_of_the_pubic_peduncle / about_the_same_as_that_of_the_ischial_peduncle_ distinctly_greater_than_that_of_the_ischial_peduncle_, 149 Dorsoventral_extension_of_the_pubic_peduncle / level_with_the_ischial_peduncle_ deeper_than_the_ischial_peduncle_, 150 Ratio_of_the_length_of_the_ilium_to_the_length_of_the_femur / '0.50-0.79 ' 0.80_or_more_, 151 Pelvis / propubic_ mesopubic_ opisthopubic_, 152 Pubic_shaft / straight_ concave_anteriorly_, 153 Pubic_foot / anterior_and_posterior_processes_about_equally_long_ anterior_process_absent_or_shorter_than_the_posterior_process_ anterior_process_longer_than_the_posterior_process_, 154 Posterior_margin_of_the_ischial_shaft / straight_or_almost_straight_ distinctly_concave_, 155 Greater_trochanter_of_the_femur / 'weakly separated, or not separated, from the femoral head ' distinctly_separated_from_the_femoral_head_, 156 Anterior_and_greater_trochanters / separated_ contacting_, 157 Dorsal_extremity_of_the_anterior_trochanter / well_below_the_greater_trochanter_ about_level_with_the_greater_trochanter_, 158 Fourth_trochanter / well_developed_ weakly_developed_or_absent_, 159 Adductor_fossa_and_the_associated_anteromedial_crest_on_the_distal_femur / weak_or_absent_ well_developed_, 160 Distal_projection_of_the_fibular_condyle_of_the_femur_beyond_the_tibial_condyle / absent_ present_, 161 Ascending_process_of_the_astragalus / as_tall_as_wide_across_the_base_ taller_than_wide_, 162 Distal_tarsals / not_fused_with_the_metatarsus_ fused_with_the_metatarsus_, 163 'Proximal coossification of metatarsals II-IV' / absent_ present_, 164 Arctometatarsus / absent_ 'present, but only proximal-most extreme of metatarsal III obscured from anterior view in articulated metatarsus' 'present, proximal ~half of metatarsal III obscured from anterior view in articulated metatarsus', 165 Length_of_metatarsal_I_constituting / more_than_50%_of_metatarsal_II_length_ less_than_50%_of_metatarsal_II_length_ metatarsal_I_absent_, 166 Ratio_of_the_maximum_length_of_the_metatarsus_to_the_length_of_the_femur / '0.4-0.6 ' ca._0.3_ '0.7-0.8 ', 167 Crenulated_tomial_margin_of_the_premaxilla / absent_ present_, 168 Frontals / 'flat or weakly arched, not strongly projecting above orbit in lateral view ' 'strongly arched, projecting well above orbit in lateral view to contribute to nasal-frontal crest ', 169 Exoccipital / 'short, weakly projecting ' 'strongly projects ventrally beyond squamosal in lateral view, approaching ventral end of the quadrate ', 170 Dentary_posterodorsal_ramus / straight_or_weakly_curved_ strongly_bowed_dorsally_, 171 Prominent_symphyseal_process_on_posteroventral_surface_of_dentary_symphysis / absent_ present_, 172 Dentary_anteroventral_margin_in_lateral_view / straight_or_weakly_downturned_ strongly_downturned_, 173 Lateral_surface_of_dentary / smooth_ 'bearing a deep fossa, sometimes with associated pneumatopore ', 174 Angular / contributes_extensively_to_the_border_of_the_external_mandibular_fenestra_ largely_excluded_from_the_border_of_the_external_mandibular_fenestra_by_the_surangular, 175 Surangular_with_an_anteroposteriorly_elongate_flange_on_the_ventral_edge / absent_ present_, 176 External_mandibular_fenestra / elongate_ height_subequal_to_length_, 177 Dentary_contribution_to_external_mandibular_fenestra / no_more_than_50%_length_of_dentary_ exceeds_50%_length_of_dentary_, 178 Metacarpal_I_expanded_ventrally_to_cover_ventral_surface_of_metacarpal_II / absent_ present_, 179 Unguals_of_manual_digits_II_and_III / strongly_curved_ weakly_curved_, 180 'Manual phalanx I-1' / slender_ 'more robust than II-1 ' 'more than 200% diameter of II-1 ', 181 'Manual phalanx III-3' / 'longer than phalanx III-2 ' 'does not exceed length of III-2 ', 182 'Manual phalanx II-2' / 'longer than II-1 ' 'subequal to or slightly shorter than II-1 ' 'distinctly shorter than II-1 ', 183 Manual_digit_II / 'elongate, with combined lengths of manual phalanges II-1 and II-2 longer than metacarpal II ' 'combined lengths of manual phalanges II-1 and II-2 subequal to metacarpal II ', 184 Ischium_strongly_bent_posteriorly_at_midshaft_distal_end_forms_an_angle_of_at_least_60 / with_proximal_end absent_ present_, 185 Metatarsus / elongate_ 'short, length does not exceed 300% of proximal width ', 186 Ilium / tall_ 'low and anteroposteriorly elongate, height less than 25% of length ', 187 Anterior_blade_of_ilium_shallower_than_posterior_blade / absent_ present_, 188 External_naris / placed_anteriorly_ 'extends posteriorly, with posterior end lying above antorbital fenestra ', 189 'Premaxillae, nasal processes anteroposteriorly expanded and mediolaterally compressed to form a bladelike internarial bar' / absent_ present_, 190 'Dentary, anterodorsal tip of beak projects' / upwards_ 'anterodorsally, tip of beak projecting at an angle of 45??? or less relative to the ventral margin of the symphysis ', 191 Dentary_symphysis_with_interior_surface_bearing_vascular_grooves_and_associated_foramina / absent_ present_, 192 'Dentary symphysis bearing an hourglass-shaped ventral depression' / absent_ present_, 193 Meckelian_groove_terminates / on_the_inside_of_the_dentary_ on_the_ventral_surface_of_the_symphysis_, 194 Lingual_triturating_shelf_of_dentary / absent_ present_, 195 'Dentary, symphyseal ridges inside the tip of the beak' / absent_ present_but_weakly_developed_ present_and_well_developed_, 196 'Dentary, lingual ridges inside the lateral occlusal surface of beak' / absent_ present_, 197 Posteroventral_process_of_dentary / straight_ bowed_ventrally_, 198 Dentaries_pneumatized / absent_ present_, 199 Dentary / participates_in_dorsal_border_of_the_external_mandibular_fenestra_ excluded_from_dorsal_border_of_external_mandibular_fenestra_by_anterior_extension_of_the_surangular_, 200 Dentary / participates_in_ventral_border_of_external_mandibular_fenestra_ excluded_from_ventral_border_of_external_mandibular_fenestra_by_anterior_extension_of_the_angular_, 201 Surangular_and_angular_divided_by_posterior_extension_of_the_external_mandibular_fenestra / absent_ present_, 202 Posterior_end_of_the_surangular / deep_ 'shallow, subequal to or shallower than angular ', 203 Surangular / deep_anteriorly_ 'strap-like ', 204 Retroarticular_process_extends / posteriorly_ posteroventrally_ posterolaterally, 205 Metacarpal_I / proportionately_broad_ 'long and slender, diameter 20% of length ', 206 'Manual phalanx I-1' / 'longer than II-2 ' 'subequal to II-2 ' 'shorter than II-2 ', 207 Ischiadic_peduncle_of_pubis_with_prominent_medial_fossa / absent_ present_, 208 'Ischium, obturator process located' / distally_ at_midshaft_of_ischium_, 209 Anterior_margin_of_obturator_process / straight_or_convex_ distinctly_concave_, 210 Accessory_trochanter_of_femur / weakly_developed_ 'prominent, subrectangular flange or finger-like process ', 211 Metatarsal_III / with_an_ovoid_or_subtriangular_cross_section_ 'anteroposteriorly flattened, with a concave posterior surface ', 212 Paroccipital_process / 'elongate and slender, with dorsal and ventral edges nearly parallel' short_and_deep_with_convex_distal_end, 213 Mandibular_articulation_surface / as_long_as_ventral_end_of_quadrate 'twice or more as long as quadrate surface, allowing anteroposterior movement of mandible', 214 'Sternum, distinct lateral xiphoid process posterior to costal margin' / absent present, 215 Anterior_edge_of_sternum / grooved_for_reception_of_coracoids without_grooves, 216 Deltopectoral_crest / 'large and distinct, proximal end of humerus quadrangular in anterior view' 'less pronounced, forming an arc rather than being quadrangular', 217 Ischium / 'more than two-thirds of pubis length' 'two-thirds or less of pubis length', 218 Lateral_ridge_of_femur / absent_or_represented_only_by_faint_rugosity 'distinctly raised from shaft, mound-like', 219 'Surangular, distinct groove on dorsal surface' / present absent, 220 'Vomer, position' / level_with_other_palatal_elements ventral_to_other_palatal_elements, 221 Calcaneum / excludes_astragalus_from_reaching_lateral_margin_of_tarsus small_process_of_astragalus_protrudes_through_a_circular_opening_in_edge_of_calcaneum_to_reach_lateral_margin_of_tarsus, 222 Depression_on_lateral_surface_of_dentary_immediately_anterior_to_external_mandibular_fenestra / absent present, 223 Groove_on_ventrolateral_edge_of_angular_to_receive_posteroventral_branch_of_dentary / absent present, 224 Posteroventral_branch_of_dentary_twisted_so_that_lateral_surface_of_branch_faces_somewhat_ventrally / absent present, 225 'Premaxilla, large, presumably pneumatic foramen at anteroventral corner of narial fossa' / absent present, 226 Accessory_opening_at_anterodorsal_extreme_of_snout / absent present, 227 Development_of_symphyseal_shelf_of_mandible / 'limited, anteroposterior length of mandibular symphysis (as measured on midline) less than 20% total anteroposterior length of mandible' 'intermediate, length of symphysis greater than 20% but less than 25% length of mandible' 'extensive, length of symphysis greater than 25% mandibular length', 228 Prominent_flange_or_shelf_arising_from_lateral_surface_of_dentary / absent_ present_, 229 Base_of_retroarticular_process / considerably_wider_mediolaterally_than_tall_dorsoventrally approximately_as_wide_as_tall considerably_taller_than_wide, 230 'Posterior-most caudal vertebrae fused, forming a pygostyle-like structure' / absent present, 231 Humeral_shaft / straight_or_nearly_straight_ strongly_bowed_laterally_, 232 'Proximodorsal "lip" on manual unguals' / 'weak (i.e., continuous or nearly continuous with remainder of dorsal surface of ungual) and/or absent' 'prominent ("set off" from remainder of dorsal surface by distinct change in slope immediately distal to "lip")', 233 'Pubic process of ischium, "hooked" anterodistal extension' / absent_ present_, 234 Posterodistal_margin_of_obturator_process / straight 'distinctly concave, apex of obturator process angled distally', 235 Proximolateral_edge_of_metatarsal_IV_attenuated_into_pointed_process / absent present, 236 Frontal_anteriorly_divided_by_slot_for_nasal_and_possibly_lacrimal / absent present, 237 Infradiapophyseal_infraprezygapophyseal_and_infrapostzygapophyseal_fossae_on_cervical_and_dorsocervical_vertebrae / one_or_more_absent all_three_present, 238 Ratio_of_the_length_of_the_metatarsus_to_the_length_of_the_tibia / '<0.5' '>0.5', 239 Tibia_ratio_of_the_transverse_width_of_the_distal_condyles_to_the_length / 0.20_or_greater '<0.20', 240 Ratio_of_minimum_transverse_width_to_length_of_tarsometatarsus / '>0.20' '<0.20', 241 Fusion_of_distal_tarsals_III_and_IV_at_maturity / absent present, 242 '''Hook-like'' posterodorsal process of distal tarsal IV' / absent present, 243 'Posterior protuberance on proximal end of tarsometatarsus caused by coossification of distal tarsals III and IV, plus MT II, III and IV' / absent present, 244 anterior_margin_of_metatarsal_V_in_lateral_view / straight_or_slightly_curved tightly_curved, 245 concavity_on_posterior_surface_of_tarsometatarsus_in_cross_section / absent_or_shallow prominent_and_deep, 246 'Transverse groove between flexor tubercle and proximal articular surface of manual ungual I-2' / absent present ; MATRIX Herrerasaurus_ischigualastensis 000100-000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001?0000000000100?0000101??000100000000-0000101000000000000100000?000?0000110110100??000??0000101??00??0000??00?1000?000000?00000?????000?00 Velociraptor_mongoliensis 000200-0000001010010100101000100000000001000000000100001000000000000000000000000000000000110000000000001001010111101101011111-1101011120211000011011112020011100010010000000000?0000000111000?0000??0010000100000000010011?000?00000000000000???000000 Archaeopteryx_lithographica 000?10-000000101101001100010001?1000-1110??0?1??0020????000????0000001?1???1000010-10000011-01000000-10100??001?00?110110010111001111111111011010-111020201?0100?1101200?0000?0?0?00000101000?0000??001?000000?0100100?111??00?00000?0000?00????000000 Incisivosaurus_gauthieri_merged 100210?101000011?0111210011?01?00?00000?100010?0??200111?10?10?01??111?0101?2101110020??00011??11?1110011???011?0?1?0??1?2???????1????????0?001?111110?????????0??0?1200000000100????????0000100000000000000??????01??????00???01000?10????00???000?00 Caudipteryx_zoui 10?210-?01??0?1110?0?21?01?10???011000011100100???????????????????0????????0??1111??2???0001??????11??0220????010????0?1??11???1011?1010200?0012110110?021100???1000121??0???0??0?00?001000?000?00000000?01000?0010??0101????0?00000?0000000??????0000 Avimimus_portentosus ?0?????????0???????????????10110??1?-0021-101??00?101111?10???????????????0?1??111???01?0???11000???-11?2100010?110??0???2?12100111?1?????00000?1110?10020101001111222100010000?0???????00??00?00????0??0000??0??1011??11110????????0?0?00100?1111000? Avimimus_nemegtensis ?0?2???01???????011202??????01?0???????2110011100?10111101011011??????????0?2101?1?0????00????????????1?2?????0??????0???2??21000??????????0001211100???2?10100111122?1?00100???????????000100100000?00??????????101???1?1??????0??0?00???1?0?1111100? Microvenator_celer ????????????????????????????????????????????????????????????????????????????1111?2?0???12001????????????2???0?1?????????0????1?0011??1????0???1111?10?112?1011101????????0101???0011?????00??0000000?0??????0?1??1?????1?0??11????00??00????1?1??????? Oviraptor_philoceratops 1???????????1?11?????21????????1??10000????0????????????????????????1?????????1?121022??00011???1??1???22???0?1????????????2???101101?212????????????????????????0?????0???001001000000??0??1????????????????0?????????0??11?0?0???0??00???0?????????0 Rinchenia_mongoliensis 11102??0111110111???1211111111?11110100111000111111?11111-11?111111112111111111112102?01100111111111-1122111011?1010010102?22101000???????011011111101????111111?0????1101?001011????????00111??????00000001????????110???1110?0?0?0?????????????????0 Citipati_osmolskae 1120211111111011011112111111111111111001110111?1??11111??101111?1111121?111111111210220110011111111110122??????1????????????????0?101?1??????????????????????????0????11011001011?01010?0??1100000000000000100?????01100?01110?001000100?0?0????00?0?0 Zamyn_Khondt_oviraptorid 112021111111101111111211111111111111100111011111111111111-111111111112111111111112102201100111111111-1122111011?1010010102102101011011112101001210100111211111111000111101?001011?0000010??110?0000000000?0100???00?1100??11???001?0??00??00?????????0 Khaan_mckennai 10201101?1111011?112121111111111?110000111000?111?111111???0??1?????1??????111111210210110011111111???1221110?1????00?0102??210??1101011210?0001100001?1211111?1100011100110010010010101111110?000?001000001000000?011100?1?10101000?0000100????000000 Conchoraptor_gracilis 10101101111110111112121111111111111000011100?1111111?1111-11111111111211111111111?102?01100111111111-1122111011?201001010112210111100111210100021000011121111111100011101?????????110???1??11????????????????0??????1?00?011?0?0000011?0??000???000000 Machairasaurus_leptonychus ????????????????????????????????????????????????????????????????????????????????????????????????????????2??????????????????????????0011??????????????????????????????????????????111110?????????????????????00?????????????????????????1?????????????0 Nemegtomaia_barsboldi 11100101111110111111121111111111?11000010101011?111111?1???11?11111112111111111112102?11100111111?11-1122111011?201????????????????????????10002???00?1????11????0????10111101011?12?11??1111000000010000001000??0??1??1??11?1?1?0001?000??00????????0 Heyuannia_huangi ??????????????????????????????????1???????????????????????????????????????????1??21021??1001????1???????21???1-12????1?????221?11000001?20???01?10100111?1???????0???????1?1?1011112?2111?1?????????0?00000100?0?0?011?00?1?11?0???0?00001??????000000 Heyuannia_yanshini ????????1???????????????11?????1?1100001110?0111111???111???11?1??111?1???11111112102?01100111111111-1122?11011?201001010102210110000110000100121000011121111111100011?011?10101111212111111100000000000000100?0000?1100001?1??0???0?000010?0000000000 Gigantoraptor_erlianensis ??????????????????????????????????????????????????????????????????????????11211112002011200111112?????1?2??????????0010?0??10?00000?11?1??1????????????1??1111111000?1???0001010000??????????0???0001001110100???0?????1?????110??112?10????????010?01 Caenagnathasia_martinsoni ????????????????????????????????????????????????????????????????????????????2101?1?????120??????????????2?100?1???1???????????????????????????????????????10?1???????????0001???0????????????0111111?1?????????????????????????????0????????0????????? Leptorhynchos_elegans ???????????????????????????????????????????????????????????????????????????12101?1?0??11200???????1?????2?????????1?????????????????????????0??1??011????????????111?????0001???????????000??0111121?111??????????1??????????1????10??????1??11111101? Chirostenotes_pergracilis ??????????????????????????????????????????????????????????????????????????1121011100201120011111211110122?1001??111001010?1??10?????0????1??1111111101???1111111100111???00010100?000102000??01111211111111112?1111?1????01?1111??101??1000?1110010111 Caenagnathus_collinsi ??????????????????????????????????????????????????????????????????????????11210111002011200111111111-1??2????????????1??????????????????????0?1110?10?10??1111111001?????00010100?0??????00??111112101111111??1??1???????01?0010??201??1??????????0??0 Anzu_wyliei ?1??10-1100?1100??????????????????0?0000???????1011??100?10??1??0?011?????112101110020112001111111?1-1122111011?1?10010102012100010????1210??1111?010110211111111001??1?000010100000??02000?0111112111011111??1111111101101?001010212011100?1?10?1?010 Hagryphus_giganteus ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????0010??????????????????????????????????????????000010??????????????????????2?????????????????????????1?????????????1 Elmisaurus_rarus ????????????????????????????1?0?????????????????????????????????????????????2101?1?0????200?????????????2???????1?1??????2??2?1????001????????????????10??111????111?0?0?0001????000010?0????0111121?1??????111??11??????0???1????10???10?111111111011 Nomingia_gobiensis ????????????????????????????????????????????????????????????????????????????????????????????????????????????0?1?11100101021????????????????1111110010110011111111??????????????????????2?00???????????????????1111??????10??1????????1??00??1?1??????? Epichirostenotes_curriei ??????????01?010??????1??????????????????????????????110?10?1??0???????????????????????????????????????2??????1?111??1???2?????????????????????????????021??????????????0??????????????2??????????????????????111??0????1???????????????10??0????????? Banji_long 11?010-111???0111102121111111011??111001?????0??11?1111?????????1111121?0111??11?21021??000110??1?11??122?1???????????????????????????????????????????????????????????11111001011??????????110??????0?00000???????????????00?0?000?0???????0?????????? Caudipteryx_dongi ??????????????????????????????????????????????????????????????????????????????????????????????????????????????01?0?????????????0010?1?10200?011?11011000211?????100012????????????00?001000?????????????????01?10????0??1?????????????000000????00000? Jiangxisaurus_ganzhouensis 1??????????1?????????????11???????1?0001????????112?????1-1?????1?01121??011111112102111100111111?????122??10?11??1??1?????221?1110?0120????0?????1???????????????????1??110010111?2?????????111??0?0100000100??????11?0?????0011?00??00?????????????? Nankangia_jiangxiensis ???????????????????????????????????????????????????????????????????????????11101?2?0????000?????????????2?????1???1??1??0?0111001?????????01110110111111211111111????????1100??????????2?00??11?????0?0???1????111?????01???1010??00??0?10??0?0??????? Shixinggia_oblita ??????????????????????????????????????????????????????????????????????????????????????????????????????????????1?2?1??1?????????????????????110000-000?????1????1?????????????????????????01??????????????????????????????????????????????????????????? Wulatelong_gobiensis 11?02101?11?1?1???02121?111?1??1?1110001???00??11????????????????1111????????????????101????1??11?????12??????1???100????2??????????1??????1100?1111111121???????000?11???????????0??????011????????????000????1????110?101????????????0??00????????0? Yulong_mini 102110-1110110110111121010111010?0100001110010?111110110???0????????0?????111111121022011001111111?1-?122?100?1????001?10??2??0000101?11110?110?100??0??1?1?0??110001110?11001011?11000?100110??????0?0000010???????1?????1110?01000??00???0????000?0? Huanansaurus_ganzhouensis 112021111111101101?11211111111111?110001110111?11100111?????1???11?11?????11111112102201100111111?????122?11011????????????????001101?112?????????????????????????????11011000011?01000????1?1?0????0100000110?????01??0??1??011??101?01???00???????00 Tongtianlong_limosus 102021111111101?011212111111101111110001100001111?21110?????011?????1?????1111011210210110011011??????122111001??01?01??0?02?1001?0???????01??????????1121??????1000?111010001011??????11??111??????01000001???10?101010??1?100010001?0??00000??0??000 Corythoraptor_jacobsi 1121111111111001???21211111?1??01?11000???????????2?1???????????????1?????111111?2102???0001??????1???122111011?111??1???2?????001101?11100110111110111121111111?1001111?11001011001010100011100000001000?0?00?1000????110???0110110??01010000?1000000 Apatoraptor_pennatus ?????????????????????????????????????????????????????????????????????0?1???1211111002011100111111111-1??21100111?????????2?1211001001120211???1110????????111101?????????00010100000?10??????01?11?11111111110???1??1101?01??011??101?01????1????????0 Oksoko_avarsan 11?211101111100101001211111111001100000111000111012001110101111111111???0001211112102211100111111??1-1122111011111100101020121010000112020010012100001112111110111001011110101011112-11111011000000001000011000101001000001010100000100001001000000000 Anomalipes_zhaoi ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????1111???001?0???????????????????????????????????????????11??????1???????????????????01?????0? ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 246; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1- 246; END; BEGIN TREES[!'tree(s) from TNT, for data in /users/greg/desktop/Matrix200330AnoGanzhou.tnt']; Title Imported_trees; ID 01712b45fe8522; LINK Taxa = Taxa; TRANSLATE [0] 1 Herrerasaurus_ischigualastensis, [1] 2 Velociraptor_mongoliensis, [2] 3 Archaeopteryx_lithographica, [3] 4 Incisivosaurus_gauthieri_merged, [4] 5 Caudipteryx_zoui, [5] 6 Avimimus_portentosus, [6] 7 Avimimus_nemegtensis, [7] 8 Microvenator_celer, [8] 9 Oviraptor_philoceratops, [9] 10 Rinchenia_mongoliensis, [10] 11 Citipati_osmolskae, [11] 12 Zamyn_Khondt_oviraptorid, [12] 13 Khaan_mckennai, [13] 14 Conchoraptor_gracilis, [14] 15 Machairasaurus_leptonychus, [15] 16 Nemegtomaia_barsboldi, [16] 17 Heyuannia_huangi, [17] 18 Heyuannia_yanshini, [18] 19 Gigantoraptor_erlianensis, [19] 20 Caenagnathasia_martinsoni, [20] 21 Leptorhynchos_elegans, [21] 22 Chirostenotes_pergracilis, [22] 23 Caenagnathus_collinsi, [23] 24 Anzu_wyliei, [24] 25 Hagryphus_giganteus, [25] 26 Elmisaurus_rarus, [26] 27 Nomingia_gobiensis, [27] 28 Epichirostenotes_curriei, [28] 29 Banji_long, [29] 30 Caudipteryx_dongi, [30] 31 Jiangxisaurus_ganzhouensis, [31] 32 Nankangia_jiangxiensis, [32] 33 Shixinggia_oblita, [33] 34 Wulatelong_gobiensis, [34] 35 Yulong_mini, [35] 36 Huanansaurus_ganzhouensis, [36] 37 Tongtianlong_limosus, [37] 38 Corythoraptor_jacobsi, [38] 39 Apatoraptor_pennatus, [39] 40 Oksoko_avarsan, [40] 41 Anomalipes_zhaoi; TREE Imported_tree_1 = (1,(2,(3,(4,((5,30),((6,7),((8,(19,(41,((27,((39,((20,28),(23,24))),(21,26))),(22,25))))),(32,(9,(35,((34,((10,37),((11,12),(36,38)))),(33,(13,(14,(15,((16,(17,18)),(29,(31,40)))))))))))))))))); END; BEGIN TREES[!'Parameters: Trees "Imported trees" from file Matrix200330 Incisivo merged only Anom no ganzhou']; Title Stored_Trees; ID 01712b46181223; LINK Taxa = Taxa; TRANSLATE [0] 1 Herrerasaurus_ischigualastensis, [1] 2 Velociraptor_mongoliensis, [2] 3 Archaeopteryx_lithographica, [3] 4 Incisivosaurus_gauthieri_merged, [4] 5 Caudipteryx_zoui, [5] 6 Avimimus_portentosus, [6] 7 Avimimus_nemegtensis, [7] 8 Microvenator_celer, [8] 9 Oviraptor_philoceratops, [9] 10 Rinchenia_mongoliensis, [10] 11 Citipati_osmolskae, [11] 12 Zamyn_Khondt_oviraptorid, [12] 13 Khaan_mckennai, [13] 14 Conchoraptor_gracilis, [14] 15 Machairasaurus_leptonychus, [15] 16 Nemegtomaia_barsboldi, [16] 17 Heyuannia_huangi, [17] 18 Heyuannia_yanshini, [18] 19 Gigantoraptor_erlianensis, [19] 20 Caenagnathasia_martinsoni, [20] 21 Leptorhynchos_elegans, [21] 22 Chirostenotes_pergracilis, [22] 23 Caenagnathus_collinsi, [23] 24 Anzu_wyliei, [24] 25 Hagryphus_giganteus, [25] 26 Elmisaurus_rarus, [26] 27 Nomingia_gobiensis, [27] 28 Epichirostenotes_curriei, [28] 29 Banji_long, [29] 30 Caudipteryx_dongi, [30] 31 Jiangxisaurus_ganzhouensis, [31] 32 Nankangia_jiangxiensis, [32] 33 Shixinggia_oblita, [33] 34 Wulatelong_gobiensis, [34] 35 Yulong_mini, [35] 36 Huanansaurus_ganzhouensis, [36] 37 Tongtianlong_limosus, [37] 38 Corythoraptor_jacobsi, [38] 39 Apatoraptor_pennatus, [39] 40 Oksoko_avarsan, [40] 41 Anomalipes_zhaoi; TREE Imported_tree_1 = (1,(2,(3,(4,((5,30),((6,7),((8,(19,(41,((27,((39,((20,28),(23,24))),(21,26))),(22,25))))),(32,(9,(35,((34,((10,37),((11,12),(36,38)))),(33,(13,(14,(15,((16,(17,18)),(29,(31,40)))))))))))))))))); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1585571356645; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4143762570863232636; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3419536181277131352; mqVersion 361; checksumv 0 3 351252609 null getNumChars 246 numChars 246 getNumTaxa 41 numTaxa 41 short true bits 7 states 7 sumSquaresStatesOnly 16682.0 sumSquares 16682.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 178; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1861 755; setLocation 0 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #4143762570863232636 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 6; setTreeBlockID 01712b46181223; toggleUseWeights off; endTell; setAssignedID 1737.1585568950678.5321671597353779188; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1683 683; setLocation 0 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientRight; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; setSelectedTaxonHighlightMode 1; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; setTaxonNameStyler #mesquite.trees.NoColorForTaxon.NoColorForTaxon; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #3419536181277131352 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1683 683; setLocation 0 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; endTell; endTell; end;